Cyprinodontoidei
319 of 623 species (51%) have genetic data.
Contents
| Taxon | Rank | Sampled / total | Sampling | Mean λDR |
|---|---|---|---|---|
| Poeciliidae | Family | 156 / 355 | 0.14 | |
| Cyprinodontidae* | Family | 72 / 140 | 0.43 | |
| Goodeidae | Family | 40 / 55 | 0.17 | |
| Fundulidae | Family | 37 / 46 | 0.11 | |
| Anablepidae | Family | 5 / 17 | 0.06 | |
| Profundulidae | Family | 7 / 8 | 0.08 | |
| Valenciidae | Family | 2 / 2 | 0.02 |
Taxa marked with * were not recovered as monophyletic in our phylogenetic analysis.
Species
Largest genera
Sampled species out of the total in each genus:
- Cyprinodon 32/57
- Gambusia 29/45
- Orestias 13/45
- Fundulus 34/41
- Poecilia 17/40
Familiar species
Well-known and model species in Cyprinodontoidei. Species with genetic data are in bold.
- Fundulus heteroclitus heteroclitus (mummichog)
- Poecilia reticulata (guppy)
- Xiphophorus maculatus (southern platyfish)
All species
Species with genetic data are in bold.
Species list
- Anableps anableps
- Jenynsia lineata
- Jenynsia maculata
- Jenynsia onca
- Oxyzygonectes dovii
- Aphanius anatoliae
- Aphanius arakensis
- Aphanius chantrei
- Aphanius danfordii
- Aphanius dispar dispar
- Aphanius dispar richardsoni
- Aphanius farsicus
- Aphanius fasciatus
- Aphanius ginaonis
- Aphanius iberus
- Aphanius isfahanensis
- Aphanius mento
- Aphanius mesopotamicus
- Aphanius saourensis
- Aphanius sirhani
- Aphanius sophiae
- Aphanius splendens
- Aphanius sureyanus
- Aphanius transgrediens
- Aphanius villwocki
- Aphanius vladykovi
- Cualac tessellatus
- Cyprinodon albivelis
- Cyprinodon alvarezi
- Cyprinodon artifrons
- Cyprinodon atrorus
- Cyprinodon bifasciatus
- Cyprinodon bondi
- Cyprinodon bovinus
- Cyprinodon dearborni
- Cyprinodon diabolis
- Cyprinodon elegans
- Cyprinodon eremus
- Cyprinodon eximius
- Cyprinodon fontinalis
- Cyprinodon higuey
- Cyprinodon hubbsi
- Cyprinodon macrolepis
- Cyprinodon macularius
- Cyprinodon meeki
- Cyprinodon nazas
- Cyprinodon nevadensis nevadensis
- Cyprinodon nichollsi
- Cyprinodon pachycephalus
- Cyprinodon pecosensis
- Cyprinodon pisteri
- Cyprinodon radiosus
- Cyprinodon riverendi
- Cyprinodon rubrofluviatilis
- Cyprinodon salinus salinus
- Cyprinodon tularosa
- Cyprinodon variegatus ovinus
- Cyprinodon variegatus variegatus
- Cyprinodon veronicae
- Floridichthys carpio
- Floridichthys polyommus
- Garmanella pulchra
- Jordanella floridae
- Megupsilon aporus
- Orestias agassizii
- Orestias ascotanensis
- Orestias chungarensis
- Orestias gilsoni
- Orestias gloriae
- Orestias imarpe
- Orestias ispi
- Orestias laucaensis
- Orestias luteus
- Orestias parinacotensis
- Orestias piacotensis
- Orestias puni
- Orestias silustani
- Adinia xenica
- Fundulus bermudae
- Fundulus bifax
- Fundulus blairae
- Fundulus catenatus
- Fundulus chrysotus
- Fundulus cingulatus
- Fundulus confluentus
- Fundulus diaphanus diaphanus
- Fundulus dispar
- Fundulus escambiae
- Fundulus euryzonus
- Fundulus grandis
- Fundulus heteroclitus heteroclitus
- Fundulus jenkinsi
- Fundulus julisia
- Fundulus kansae
- Fundulus lima
- Fundulus lineolatus
- Fundulus luciae
- Fundulus majalis
- Fundulus notatus
- Fundulus nottii
- Fundulus olivaceus
- Fundulus parvipinnis
- Fundulus pulvereus
- Fundulus rathbuni
- Fundulus relictus
- Fundulus rubrifrons
- Fundulus sciadicus
- Fundulus seminolis
- Fundulus similis
- Fundulus stellifer
- Fundulus waccamensis
- Fundulus zebrinus
- Lucania goodei
- Lucania parva
- Allodontichthys hubbsi
- Allodontichthys polylepis
- Allodontichthys tamazulae
- Allodontichthys zonistius
- Alloophorus robustus
- Allotoca catarinae
- Allotoca diazi
- Allotoca dugesii
- Allotoca goslinei
- Allotoca maculata
- Allotoca meeki
- Allotoca regalis
- Allotoca zacapuensis
- Ameca splendens
- Ataeniobius toweri
- Chapalichthys encaustus
- Chapalichthys pardalis
- Characodon audax
- Characodon lateralis
- Crenichthys baileyi baileyi
- Empetrichthys latos latos
- Girardinichthys multiradiatus
- Girardinichthys viviparus
- Goodea atripinnis
- Goodea gracilis
- Hubbsina turneri
- Ilyodon furcidens
- Ilyodon whitei
- Ilyodon xantusi
- Skiffia bilineata
- Skiffia francesae
- Skiffia lermae
- Skiffia multipunctata
- Xenoophorus captivus
- Xenotaenia resolanae
- Xenotoca eiseni
- Xenotoca melanosoma
- Xenotoca variata
- Zoogoneticus quitzeoensis
- Zoogoneticus tequila
- Alfaro cultratus
- Alfaro huberi
- Belonesox belizanus
- Brachyrhaphis cascajalensis
- Brachyrhaphis episcopi
- Brachyrhaphis hartwegi
- Brachyrhaphis holdridgei
- Brachyrhaphis parismina
- Brachyrhaphis rhabdophora
- Brachyrhaphis roseni
- Brachyrhaphis terrabensis
- Carlhubbsia kidderi
- Carlhubbsia stuarti
- Cnesterodon decemmaculatus
- Cnesterodon hypselurus
- Gambusia affinis
- Gambusia atrora
- Gambusia aurata
- Gambusia clarkhubbsi
- Gambusia eurystoma
- Gambusia gaigei
- Gambusia geiseri
- Gambusia heterochir
- Gambusia hispaniolae
- Gambusia holbrooki
- Gambusia hurtadoi
- Gambusia krumholzi
- Gambusia lemaitrei
- Gambusia luma
- Gambusia manni
- Gambusia marshi
- Gambusia melapleura
- Gambusia nicaraguensis
- Gambusia panuco
- Gambusia punctata
- Gambusia puncticulata
- Gambusia regani
- Gambusia rhizophorae
- Gambusia sexradiata
- Gambusia speciosa
- Gambusia vittata
- Gambusia wrayi
- Gambusia yucatana
- Gambusia zarskei
- Girardinus creolus
- Girardinus denticulatus
- Girardinus falcatus
- Girardinus metallicus
- Girardinus microdactylus
- Girardinus uninotatus
- Heterandria formosa
- Heterophallus milleri
- Heterophallus rachovii
- Limia caymanensis
- Limia dominicensis
- Limia heterandria
- Limia melanogaster
- Limia melanonotata
- Limia nigrofasciata
- Limia pauciradiata
- Limia perugiae
- Limia tridens
- Limia versicolor
- Limia vittata
- Limia zonata
- Micropoecilia bifurca
- Micropoecilia branneri
- Micropoecilia picta
- Neoheterandria elegans
- Neoheterandria tridentiger
- Pamphorichthys araguaiensis
- Pamphorichthys hasemani
- Pamphorichthys hollandi
- Pamphorichthys minor
- Pamphorichthys scalpridens
- Phallichthys amates
- Phallichthys quadripunctatus
- Phallichthys tico
- Phalloptychus januarius
- Poecilia butleri
- Poecilia catemaconis
- Poecilia caucana
- Poecilia gillii
- Poecilia latipinna
- Poecilia latipunctata
- Poecilia mexicana
- Poecilia obscura
- Poecilia orri
- Poecilia parae
- Poecilia petenensis
- Poecilia reticulata
- Poecilia sphenops
- Poecilia sulphuraria
- Poecilia velifera
- Poecilia vivipara
- Poecilia wingei
- Poeciliopsis baenschi
- Poeciliopsis catemaco
- Poeciliopsis elongata
- Poeciliopsis fasciata
- Poeciliopsis gracilis
- Poeciliopsis hnilickai
- Poeciliopsis infans
- Poeciliopsis latidens
- Poeciliopsis lucida
- Poeciliopsis monacha
- Poeciliopsis occidentalis
- Poeciliopsis paucimaculata
- Poeciliopsis pleurospilus
- Poeciliopsis presidionis
- Poeciliopsis prolifica
- Poeciliopsis retropinna
- Poeciliopsis scarlli
- Poeciliopsis sonoriensis
- Poeciliopsis turneri
- Poeciliopsis turrubarensis
- Poeciliopsis viriosa
- Priapella chamulae
- Priapella compressa
- Priapella intermedia
- Priapella lacandonae
- Priapella olmecae
- Priapichthys annectens
- Priapichthys puetzi
- Pseudopoecilia festae
- Pseudoxiphophorus bimaculatus
- Pseudoxiphophorus jonesii
- Pseudoxiphophorus obliquus
- Quintana atrizona
- Scolichthys greenwayi
- Xenodexia ctenolepis
- Xenophallus umbratilis
- Xiphophorus alvarezi
- Xiphophorus andersi
- Xiphophorus clemenciae
- Xiphophorus continens
- Xiphophorus cortezi
- Xiphophorus couchianus
- Xiphophorus evelynae
- Xiphophorus gordoni
- Xiphophorus hellerii
- Xiphophorus kallmani
- Xiphophorus maculatus
- Xiphophorus malinche
- Xiphophorus mayae
- Xiphophorus meyeri
- Xiphophorus milleri
- Xiphophorus mixei
- Xiphophorus montezumae
- Xiphophorus monticolus
- Xiphophorus nezahualcoyotl
- Xiphophorus nigrensis
- Xiphophorus pygmaeus
- Xiphophorus signum
- Xiphophorus variatus
- Xiphophorus xiphidium
- Profundulus candalarius
- Profundulus guatemalensis
- Profundulus hildebrandi
- Profundulus labialis
- Profundulus oaxacae
- Profundulus portillorum
- Profundulus punctatus
- Valencia hispanica
- Valencia letourneuxi
- Anableps dowei
- Anableps microlepis
- Jenynsia alternimaculata
- Jenynsia diphyes
- Jenynsia eigenmanni
- Jenynsia eirmostigma
- Jenynsia multidentata
- Jenynsia obscura
- Jenynsia sanctaecatarinae
- Jenynsia tucumana
- Jenynsia unitaenia
- Jenynsia weitzmani
- Aphanius almiriensis
- Aphanius apodus
- Aphanius asquamatus
- Aphanius baeticus
- Aphanius burdurensis
- Aphanius desioi
- Aphanius pluristriatus
- Aphanius punctatus
- Aphanius stiassnyae
- Cubanichthys cubensis
- Cubanichthys pengelleyi
- Cyprinodon arcuatus
- Cyprinodon beltrani
- Cyprinodon bobmilleri
- Cyprinodon brontotheroides
- Cyprinodon ceciliae
- Cyprinodon desquamator
- Cyprinodon esconditus
- Cyprinodon inmemoriam
- Cyprinodon julimes
- Cyprinodon labiosus
- Cyprinodon laciniatus
- Cyprinodon latifasciatus
- Cyprinodon longidorsalis
- Cyprinodon maya
- Cyprinodon nevadensis amargosae
- Cyprinodon nevadensis calidae
- Cyprinodon nevadensis mionectes
- Cyprinodon nevadensis pectoralis
- Cyprinodon nevadensis shoshone
- Cyprinodon salinus milleri
- Cyprinodon salvadori
- Cyprinodon simus
- Cyprinodon suavium
- Cyprinodon variegatus baconi
- Cyprinodon verecundus
- Orestias albus
- Orestias crawfordi
- Orestias ctenolepis
- Orestias cuvieri
- Orestias elegans
- Orestias empyraeus
- Orestias forgeti
- Orestias frontosus
- Orestias gracilis
- Orestias gymnotus
- Orestias hardini
- Orestias incae
- Orestias jussiei
- Orestias lastarriae
- Orestias minimus
- Orestias minutus
- Orestias mooni
- Orestias mulleri
- Orestias multiporis
- Orestias mundus
- Orestias olivaceus
- Orestias pentlandii
- Orestias polonorum
- Orestias richersoni
- Orestias robustus
- Orestias taquiri
- Orestias tchernavini
- Orestias tomcooni
- Orestias tschudii
- Orestias tutini
- Orestias uruni
- Orestias ututo
- Fundulus albolineatus
- Fundulus diaphanus menona
- Fundulus grandissimus
- Fundulus heteroclitus macrolepidotus
- Fundulus persimilis
- Fundulus philpisteri
- Fundulus saguanus
- Leptolucania ommata
- Lucania interioris
- Chapalichthys peraticus
- Characodon garmani
- Crenichthys baileyi albivallis
- Crenichthys baileyi grandis
- Crenichthys baileyi moapae
- Crenichthys baileyi thermophilus
- Crenichthys nevadae
- Empetrichthys latos concavus
- Empetrichthys latos pahrump
- Empetrichthys merriami
- Girardinichthys ireneae
- Goodea luitpoldii
- Ilyodon cortesae
- Ilyodon lennoni
- Zoogoneticus purhepechus
- Aplocheilichthys antinorii
- Aplocheilichthys atripinna
- Aplocheilichthys brichardi
- Aplocheilichthys bukobanus
- Aplocheilichthys centralis
- Aplocheilichthys fuelleborni
- Aplocheilichthys hutereaui
- Aplocheilichthys jeanneli
- Aplocheilichthys johnstoni
- Aplocheilichthys katangae
- Aplocheilichthys kingii
- Aplocheilichthys kongoranensis
- Aplocheilichthys lacustris
- Aplocheilichthys lualabaensis
- Aplocheilichthys macrurus
- Aplocheilichthys mahagiensis
- Aplocheilichthys meyburghi
- Aplocheilichthys moeruensis
- Aplocheilichthys myaposae
- Aplocheilichthys myersi
- Aplocheilichthys pumilus
- Aplocheilichthys rudolfianus
- Aplocheilichthys spilauchen
- Aplocheilichthys vitschumbaensis
- Brachyrhaphis hessfeldi
- Brachyrhaphis olomina
- Brachyrhaphis punctifer
- Brachyrhaphis roswithae
- Cnesterodon brevirostratus
- Cnesterodon carnegiei
- Cnesterodon holopteros
- Cnesterodon iguape
- Cnesterodon omorgmatos
- Cnesterodon pirai
- Cnesterodon raddai
- Cnesterodon septentrionalis
- Fluviphylax obscurus
- Fluviphylax palikur
- Fluviphylax pygmaeus
- Fluviphylax simplex
- Fluviphylax zonatus
- Gambusia alvarezi
- Gambusia amistadensis
- Gambusia baracoana
- Gambusia beebei
- Gambusia bucheri
- Gambusia dominicensis
- Gambusia echeagarayi
- Gambusia georgei
- Gambusia longispinis
- Gambusia monticola
- Gambusia myersi
- Gambusia nobilis
- Gambusia pseudopunctata
- Gambusia quadruncus
- Gambusia senilis
- Gambusia xanthosoma
- Girardinus cubensis
- Heterandria anzuetoi
- Heterandria attenuata
- Heterandria bimaculata
- Heterandria cataractae
- Heterandria dirempta
- Heterandria jonesii
- Heterandria litoperas
- Heterandria tuxtlaensis
- Hylopanchax leki
- Hylopanchax moke
- Hylopanchax ndeko
- Hylopanchax silvestris
- Hylopanchax stictopleuron
- Hypsopanchax catenatus
- Hypsopanchax deprimozi
- Hypsopanchax jobaerti
- Hypsopanchax jubbi
- Hypsopanchax platysternus
- Hypsopanchax zebra
- Lacustricola maculatus
- Lacustricola matthesi
- Lacustricola mediolateralis
- Lacustricola nigrolateralis
- Lacustricola omoculatus
- Lacustricola usanguensis
- Lamprichthys tanganicanus
- Limia fuscomaculata
- Limia garnieri
- Limia grossidens
- Limia immaculata
- Limia miragoanensis
- Limia ornata
- Limia rivasi
- Limia sulphurophila
- Limia yaguajali
- Micropanchax bracheti
- Micropanchax camerunensis
- Micropanchax ehrichi
- Micropanchax keilhacki
- Micropanchax loati
- Micropanchax macrophthalmus
- Micropanchax pelagicus
- Micropanchax pfaffi
- Micropanchax scheeli
- Micropoecilia minima
- Neoheterandria cana
- Pamphorichthys pertapeh
- Pantanodon madagascariensis
- Pantanodon stuhlmanni
- Phallichthys fairweatheri
- Phalloceros alessandrae
- Phalloceros anisophallos
- Phalloceros aspilos
- Phalloceros buckupi
- Phalloceros caudimaculatus
- Phalloceros elachistos
- Phalloceros enneaktinos
- Phalloceros harpagos
- Phalloceros heptaktinos
- Phalloceros leptokeras
- Phalloceros leticiae
- Phalloceros lucenorum
- Phalloceros malabarbai
- Phalloceros megapolos
- Phalloceros mikrommatos
- Phalloceros ocellatus
- Phalloceros pellos
- Phalloceros reisi
- Phalloceros spiloura
- Phalloceros titthos
- Phalloceros tupinamba
- Phalloceros uai
- Phalloptychus eigenmanni
- Phallotorynus dispilos
- Phallotorynus fasciolatus
- Phallotorynus jucundus
- Phallotorynus pankalos
- Phallotorynus psittakos
- Phallotorynus victoriae
- Plataplochilus cabindae
- Plataplochilus chalcopyrus
- Plataplochilus loemensis
- Plataplochilus miltotaenia
- Plataplochilus mimus
- Plataplochilus ngaensis
- Plataplochilus pulcher
- Plataplochilus terveri
- Platypanchax modestus
- Poecilia boesemani
- Poecilia caudofasciata
- Poecilia chica
- Poecilia dauli
- Poecilia dominicensis
- Poecilia elegans
- Poecilia formosa
- Poecilia hispaniolana
- Poecilia hondurensis
- Poecilia kempkesi
- Poecilia koperi
- Poecilia kykesis
- Poecilia marcellinoi
- Poecilia maylandi
- Poecilia mechthildae
- Poecilia nicholsi
- Poecilia rositae
- Poecilia salvatoris
- Poecilia sarrafae
- Poecilia teresae
- Poecilia vandepolli
- Poecilia waiapi
- Poecilia wandae
- Poeciliopsis balsas
- Poeciliopsis lutzi
- Poeciliopsis santaelena
- Poropanchax hannerzi
- Poropanchax luxophthalmus
- Poropanchax normani
- Poropanchax rancureli
- Poropanchax stigmatopygus
- Priapella bonita
- Priapichthys caliensis
- Priapichthys chocoensis
- Priapichthys darienensis
- Priapichthys nigroventralis
- Priapichthys panamensis
- Procatopus aberrans
- Procatopus nototaenia
- Procatopus similis
- Procatopus websteri
- Pseudopoecilia austrocolumbiana
- Pseudopoecilia fria
- Rhexipanchax kabae
- Rhexipanchax lamberti
- Rhexipanchax nimbaensis
- Rhexipanchax schioetzi
- Scolichthys iota
- Tomeurus gracilis
- Xiphophorus birchmanni
- Xiphophorus kosszanderi
- Xiphophorus multilineatus
- Xiphophorus roseni
- Profundulus kreiseri
Gene coverage
Share of the 319 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| cytb | 280 | 88% |
| coi | 122 | 38% |
| nd2 | 116 | 36% |
| rag1 | 87 | 27% |
| 12s | 80 | 25% |
| 16s | 35 | 11% |
| myh6 | 33 | 10% |
| enc1 | 27 | 8% |
| sh3px3 | 27 | 8% |
| glyt | 26 | 8% |
| rhodopsin | 24 | 8% |
| plagl2 | 12 | 4% |
| tbr1 | 12 | 4% |
| ptr | 11 | 3% |
| kiaa1239 | 10 | 3% |
| ficd | 9 | 3% |
| sidkey | 9 | 3% |
| panx2 | 8 | 3% |
| hoxc6a | 7 | 2% |
| sreb2 | 5 | 2% |
| vcpip | 4 | 1% |
| svep1 | 3 | 1% |
| zic1 | 3 | 1% |
| ripk4 | 2 | 1% |
| 4c4 | 1 | <1% |
| nd4 | 0 | 0% |
| rag2 | 0 | 0% |
Enclosed taxa
Fossil calibrations
- Total group Valenciidae (Francolebias aymardi†) 28.1 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Cyprinodontoidei data (JSON format)
Species list for Cyprinodontoidei (CSV format)
Phylogenies
Sequence data
Phylip sequences for Cyprinodontoidei
Nexus file for Cyprinodontoidei (includes character partitions and phylogeny)