Cyprinodontidae
72 of 140 species (51%) have genetic data.
Species
Largest genera
Sampled species out of the total in each genus:
- Cyprinodon 32/57
- Orestias 13/45
- Aphanius 21/30
- Cubanichthys 0/2
- Floridichthys 2/2
All species
Species with genetic data are in bold.
Species list
- Aphanius anatoliae
- Aphanius arakensis
- Aphanius chantrei
- Aphanius danfordii
- Aphanius dispar dispar
- Aphanius dispar richardsoni
- Aphanius farsicus
- Aphanius fasciatus
- Aphanius ginaonis
- Aphanius iberus
- Aphanius isfahanensis
- Aphanius mento
- Aphanius mesopotamicus
- Aphanius saourensis
- Aphanius sirhani
- Aphanius sophiae
- Aphanius splendens
- Aphanius sureyanus
- Aphanius transgrediens
- Aphanius villwocki
- Aphanius vladykovi
- Cualac tessellatus
- Cyprinodon albivelis
- Cyprinodon alvarezi
- Cyprinodon artifrons
- Cyprinodon atrorus
- Cyprinodon bifasciatus
- Cyprinodon bondi
- Cyprinodon bovinus
- Cyprinodon dearborni
- Cyprinodon diabolis
- Cyprinodon elegans
- Cyprinodon eremus
- Cyprinodon eximius
- Cyprinodon fontinalis
- Cyprinodon higuey
- Cyprinodon hubbsi
- Cyprinodon macrolepis
- Cyprinodon macularius
- Cyprinodon meeki
- Cyprinodon nazas
- Cyprinodon nevadensis nevadensis
- Cyprinodon nichollsi
- Cyprinodon pachycephalus
- Cyprinodon pecosensis
- Cyprinodon pisteri
- Cyprinodon radiosus
- Cyprinodon riverendi
- Cyprinodon rubrofluviatilis
- Cyprinodon salinus salinus
- Cyprinodon tularosa
- Cyprinodon variegatus ovinus
- Cyprinodon variegatus variegatus
- Cyprinodon veronicae
- Floridichthys carpio
- Floridichthys polyommus
- Garmanella pulchra
- Jordanella floridae
- Megupsilon aporus
- Orestias agassizii
- Orestias ascotanensis
- Orestias chungarensis
- Orestias gilsoni
- Orestias gloriae
- Orestias imarpe
- Orestias ispi
- Orestias laucaensis
- Orestias luteus
- Orestias parinacotensis
- Orestias piacotensis
- Orestias puni
- Orestias silustani
- Aphanius almiriensis
- Aphanius apodus
- Aphanius asquamatus
- Aphanius baeticus
- Aphanius burdurensis
- Aphanius desioi
- Aphanius pluristriatus
- Aphanius punctatus
- Aphanius stiassnyae
- Cubanichthys cubensis
- Cubanichthys pengelleyi
- Cyprinodon arcuatus
- Cyprinodon beltrani
- Cyprinodon bobmilleri
- Cyprinodon brontotheroides
- Cyprinodon ceciliae
- Cyprinodon desquamator
- Cyprinodon esconditus
- Cyprinodon inmemoriam
- Cyprinodon julimes
- Cyprinodon labiosus
- Cyprinodon laciniatus
- Cyprinodon latifasciatus
- Cyprinodon longidorsalis
- Cyprinodon maya
- Cyprinodon nevadensis amargosae
- Cyprinodon nevadensis calidae
- Cyprinodon nevadensis mionectes
- Cyprinodon nevadensis pectoralis
- Cyprinodon nevadensis shoshone
- Cyprinodon salinus milleri
- Cyprinodon salvadori
- Cyprinodon simus
- Cyprinodon suavium
- Cyprinodon variegatus baconi
- Cyprinodon verecundus
- Orestias albus
- Orestias crawfordi
- Orestias ctenolepis
- Orestias cuvieri
- Orestias elegans
- Orestias empyraeus
- Orestias forgeti
- Orestias frontosus
- Orestias gracilis
- Orestias gymnotus
- Orestias hardini
- Orestias incae
- Orestias jussiei
- Orestias lastarriae
- Orestias minimus
- Orestias minutus
- Orestias mooni
- Orestias mulleri
- Orestias multiporis
- Orestias mundus
- Orestias olivaceus
- Orestias pentlandii
- Orestias polonorum
- Orestias richersoni
- Orestias robustus
- Orestias taquiri
- Orestias tchernavini
- Orestias tomcooni
- Orestias tschudii
- Orestias tutini
- Orestias uruni
- Orestias ututo
Gene coverage
Share of the 72 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| cytb | 52 | 72% |
| nd2 | 43 | 60% |
| 12s | 23 | 32% |
| 16s | 12 | 17% |
| coi | 7 | 10% |
| ficd | 2 | 3% |
| hoxc6a | 2 | 3% |
| kiaa1239 | 2 | 3% |
| myh6 | 2 | 3% |
| sidkey | 2 | 3% |
| vcpip | 2 | 3% |
| panx2 | 1 | 1% |
| ptr | 1 | 1% |
| ripk4 | 1 | 1% |
| svep1 | 1 | 1% |
| 4c4 | 0 | 0% |
| enc1 | 0 | 0% |
| glyt | 0 | 0% |
| nd4 | 0 | 0% |
| plagl2 | 0 | 0% |
| rag1 | 0 | 0% |
| rag2 | 0 | 0% |
| rhodopsin | 0 | 0% |
| sh3px3 | 0 | 0% |
| sreb2 | 0 | 0% |
| tbr1 | 0 | 0% |
| zic1 | 0 | 0% |
Fossil calibrations
No internal fossil calibrations are available for this group.
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Cyprinodontidae data (JSON format)
Species list for Cyprinodontidae (CSV format)
Phylogenies
There were 247 species that caused Cyprinodontidae to be inferred as paraphyletic.
Time-calibrated phylogeny of only species in Cyprinodontidae
Time-calibrated phylogeny of "Cyprinodontidae"
Sequence data
Phylip sequences for Cyprinodontidae
Nexus file for Cyprinodontidae (includes character partitions and phylogeny)