Holocentriformes
43 of 83 species (52%) have genetic data.
Contents
| Taxon | Rank | Sampled / total | Sampling | Mean λDR |
|---|---|---|---|---|
| Holocentridae | Family | 43 / 83 | 0.14 |
Species
Largest genera
Sampled species out of the total in each genus:
- Sargocentron 19/33
- Myripristis 13/28
- Ostichthys 2/11
- Neoniphon 5/5
- Holocentrus 2/2
All species
Species with genetic data are in bold.
Species list
- Holocentrus adscensionis
- Holocentrus rufus
- Myripristis amaena
- Myripristis berndti
- Myripristis botche
- Myripristis chryseres
- Myripristis hexagona
- Myripristis jacobus
- Myripristis kuntee
- Myripristis leiognathus
- Myripristis murdjan
- Myripristis pralinia
- Myripristis randalli
- Myripristis violacea
- Myripristis vittata
- Neoniphon argenteus
- Neoniphon aurolineatus
- Neoniphon marianus
- Neoniphon opercularis
- Neoniphon sammara
- Ostichthys japonicus
- Ostichthys trachypoma
- Plectrypops lima
- Plectrypops retrospinis
- Sargocentron caudimaculatum
- Sargocentron cornutum
- Sargocentron coruscum
- Sargocentron diadema
- Sargocentron inaequalis
- Sargocentron ittodai
- Sargocentron melanospilos
- Sargocentron microstoma
- Sargocentron praslin
- Sargocentron punctatissimum
- Sargocentron rubrum
- Sargocentron seychellense
- Sargocentron spiniferum
- Sargocentron suborbitale
- Sargocentron tiere
- Sargocentron tiereoides
- Sargocentron vexillarium
- Sargocentron violaceum
- Sargocentron xantherythrum
- Corniger spinosus
- Myripristis adusta
- Myripristis astakhovi
- Myripristis aulacodes
- Myripristis clarionensis
- Myripristis earlei
- Myripristis formosa
- Myripristis gildi
- Myripristis greenfieldi
- Myripristis kochiensis
- Myripristis robusta
- Myripristis seychellensis
- Myripristis tiki
- Myripristis trachyacron
- Myripristis woodsi
- Myripristis xanthacra
- Ostichthys acanthorhinus
- Ostichthys archiepiscopus
- Ostichthys brachygnathus
- Ostichthys delta
- Ostichthys hypsipterygion
- Ostichthys kaianus
- Ostichthys ovaloculus
- Ostichthys sandix
- Ostichthys sheni
- Pristilepis oligolepis
- Sargocentron bullisi
- Sargocentron dorsomaculatum
- Sargocentron ensifer
- Sargocentron hastatum
- Sargocentron hormion
- Sargocentron iota
- Sargocentron lepros
- Sargocentron macrosquamis
- Sargocentron marisrubri
- Sargocentron megalops
- Sargocentron poco
- Sargocentron shimizui
- Sargocentron spinosissimum
- Sargocentron wilhelmi
Gene coverage
Share of the 43 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| coi | 42 | 98% |
| enc1 | 38 | 88% |
| myh6 | 38 | 88% |
| glyt | 37 | 86% |
| ptr | 33 | 77% |
| rag1 | 33 | 77% |
| plagl2 | 17 | 40% |
| panx2 | 15 | 35% |
| cytb | 14 | 33% |
| kiaa1239 | 13 | 30% |
| ficd | 12 | 28% |
| ripk4 | 12 | 28% |
| sidkey | 12 | 28% |
| zic1 | 12 | 28% |
| rhodopsin | 11 | 26% |
| tbr1 | 8 | 19% |
| hoxc6a | 6 | 14% |
| 12s | 5 | 12% |
| svep1 | 5 | 12% |
| 16s | 4 | 9% |
| sreb2 | 3 | 7% |
| sh3px3 | 2 | 5% |
| vcpip | 2 | 5% |
| 4c4 | 0 | 0% |
| nd2 | 0 | 0% |
| nd4 | 0 | 0% |
| rag2 | 0 | 0% |
Enclosed taxa
1 family
- Family
- Holocentridae
Fossil calibrations
- Crown Holocentridae (Berybolcensis leptacanthus†) 49 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Holocentriformes data (JSON format)
Species list for Holocentriformes (CSV format)
Phylogenies
Sequence data
Phylip sequences for Holocentriformes
Nexus file for Holocentriformes (includes character partitions and phylogeny)