Beryciformes

51 of 181 species (28%) have genetic data.

Taxon	Rank	Sampled / total	Sampling	Mean λ_DR
Melamphaidae	Family	13 / 61	21%	0.07
Trachichthyidae*	Family	14 / 51	27%	0.13
Cetomimidae	Family	7 / 30	23%	0.26
Berycidae	Family	9 / 10	90%	0.06
Anomalopidae	Family	0 / 9	0%
Diretmidae	Family	2 / 4	50%	0.03
Monocentridae	Family	1 / 4	25%	0.06
Stephanoberycidae	Family	1 / 4	25%	0.05
Anoplogastridae	Family	1 / 2	50%	0.07
Gibberichthyidae	Family	0 / 2	0%
Rondeletiidae	Family	2 / 2	100%	0.03
Barbourisiidae	Family	1 / 1	100%	0.10
Hispidoberycidae	Family	0 / 1	0%

Taxa marked with * were not recovered as monophyletic in our phylogenetic analysis.

Species

Largest genera

Sampled species out of the total in each genus:

Hoplostethus 10/32
Melamphaes 5/25
Poromitra 3/22
Scopeloberyx 1/9
Aulotrachichthys 2/8

All species

Species with genetic data are in bold.

Species list

Anoplogaster cornuta
Barbourisia rufa
Beryx decadactylus
Beryx mollis
Beryx splendens
Centroberyx affinis
Centroberyx australis
Centroberyx druzhinini
Centroberyx gerrardi
Centroberyx lineatus
Centroberyx spinosus
Cetomimus craneae
Cetostoma regani
Ditropichthys storeri
Gyrinomimus bruuni
Gyrinomimus grahami
Gyrinomimus myersi
Parataeniophorus brevis
Diretmichthys parini
Diretmus argenteus
Melamphaes lugubris
Melamphaes parvus
Melamphaes polylepis
Melamphaes simus
Melamphaes suborbitalis
Poromitra capito
Poromitra crassiceps
Poromitra megalops
Scopeloberyx robustus
Scopelogadus beanii
Scopelogadus mizolepis bispinosus
Scopelogadus mizolepis mizolepis
Sio nordenskjoldii
Monocentris japonica
Rondeletia bicolor
Rondeletia loricata
Acanthochaenus luetkenii
Aulotrachichthys prosthemius
Aulotrachichthys sajademalensis
Gephyroberyx darwinii
Hoplostethus atlanticus
Hoplostethus cadenati
Hoplostethus crassispinus
Hoplostethus gigas
Hoplostethus japonicus
Hoplostethus latus
Hoplostethus mediterraneus mediterraneus
Hoplostethus melanopus
Hoplostethus occidentalis
Hoplostethus ravurictus
Paratrachichthys macleayi
Anomalops katoptron
Kryptophanaron alfredi
Parmops coruscans
Parmops echinatus
Photoblepharon palpebratum
Photoblepharon steinitzi
Phthanophaneron harveyi
Protoblepharon mccoskeri
Protoblepharon rosenblatti
Anoplogaster brachycera
Centroberyx rubricaudus
Ataxolepis apus
Ataxolepis henactis
Cetichthys indagator
Cetichthys parini
Cetomimoides parri
Cetomimus compunctus
Cetomimus gillii
Cetomimus hempeli
Cetomimus kerdops
Cetomimus picklei
Cetomimus teevani
Danacetichthys galathenus
Eutaeniophorus festivus
Gyrinomimus andriashevi
Gyrinomimus parri
Megalomycter teevani
Mirapinna esau
Notocetichthys trunovi
Parataeniophorus bertelseni
Parataeniophorus gulosus
Procetichthys kreffti
Rhamphocetichthys savagei
Vitiaziella cubiceps
Diretmoides pauciradiatus
Diretmoides veriginae
Gibberichthys latifrons
Gibberichthys pumilus
Hispidoberyx ambagiosus
Melamphaes acanthomus
Melamphaes danae
Melamphaes ebelingi
Melamphaes eulepis
Melamphaes falsidicus
Melamphaes hubbsi
Melamphaes indicus
Melamphaes janae
Melamphaes laeviceps
Melamphaes leprus
Melamphaes longivelis
Melamphaes macrocephalus
Melamphaes manifestus
Melamphaes microps
Melamphaes pachystomus
Melamphaes parini
Melamphaes pumilus
Melamphaes spinifer
Melamphaes typhlops
Melamphaes xestoachidus
Poromitra agafonovae
Poromitra atlantica
Poromitra coronata
Poromitra crassa
Poromitra cristiceps
Poromitra curilensis
Poromitra decipiens
Poromitra frontosa
Poromitra gibbsi
Poromitra glochidiata
Poromitra indooceanica
Poromitra jucunda
Poromitra kukuevi
Poromitra macrophthalma
Poromitra nigriceps
Poromitra nigrofulva
Poromitra oscitans
Poromitra rugosa
Poromitra unicornis
Scopeloberyx bannikovi
Scopeloberyx malayanus
Scopeloberyx maxillaris
Scopeloberyx microlepis
Scopeloberyx opisthopterus
Scopeloberyx pequenoi
Scopeloberyx rossicus
Scopeloberyx rubriventer
Scopelogadus unispinis
Cleidopus gloriamaris
Monocentris neozelanicus
Monocentris reedi
Abyssoberyx levisquamosus
Malacosarcus macrostoma
Stephanoberyx monae
Aulotrachichthys argyrophanus
Aulotrachichthys atlanticus
Aulotrachichthys heptalepis
Aulotrachichthys latus
Aulotrachichthys novaezelandicus
Aulotrachichthys pulsator
Gephyroberyx japonicus
Hoplostethus abramovi
Hoplostethus confinis
Hoplostethus druzhinini
Hoplostethus fedorovi
Hoplostethus fragilis
Hoplostethus grandperrini
Hoplostethus intermedius
Hoplostethus marisrubri
Hoplostethus mediterraneus sonodae
Hoplostethus mediterraneus trunovi
Hoplostethus melanopeza
Hoplostethus melanopterus
Hoplostethus mento
Hoplostethus metallicus
Hoplostethus mikhailini
Hoplostethus pacificus
Hoplostethus rifti
Hoplostethus robustispinus
Hoplostethus rubellopterus
Hoplostethus shubnikovi
Hoplostethus tenebricus
Hoplostethus vniro
Optivus agastos
Optivus agrammus
Optivus elongatus
Paratrachichthys fernandezianus
Paratrachichthys trailli
Parinoberyx horridus
Sorosichthys ananassa
Trachichthys australis

Gene coverage

Share of the 51 sampled species with data for each gene

Gene	Species with data	% of sampled species
coi	32	63%
16s	28	55%
myh6	16	31%
plagl2	16	31%
cytb	15	29%
ptr	15	29%
rag1	14	27%
ripk4	14	27%
sh3px3	13	25%
12s	12	24%
ficd	12	24%
kiaa1239	12	24%
zic1	12	24%
glyt	11	22%
panx2	11	22%
tbr1	9	18%
sidkey	7	14%
sreb2	7	14%
rhodopsin	6	12%
hoxc6a	5	10%
svep1	5	10%
enc1	2	4%
vcpip	2	4%
4c4	1	2%
nd2	0	0%
nd4	0	0%
rag2	0	0%