Gonostomatidae
22 of 26 species (85%) have genetic data.
Species
Largest genera
Sampled species out of the total in each genus:
- Cyclothone 12/13
- Sigmops 4/4
- Gonostoma 3/3
- Manducus 0/2
- Margrethia 1/2
All species
Species with genetic data are in bold.
Species list
- Bonapartia pedaliota
- Cyclothone acclinidens
- Cyclothone alba
- Cyclothone atraria
- Cyclothone kobayashii
- Cyclothone livida
- Cyclothone microdon
- Cyclothone obscura
- Cyclothone pallida
- Cyclothone parapallida
- Cyclothone pseudopallida
- Cyclothone pygmaea
- Cyclothone signata
- Gonostoma atlanticum
- Gonostoma denudatum
- Gonostoma elongatum
- Margrethia obtusirostra
- Sigmops bathyphilus
- Sigmops ebelingi
- Sigmops gracilis
- Sigmops longipinnis
- Triplophos hemingi
- Cyclothone braueri
- Manducus greyae
- Manducus maderensis
- Margrethia valentinae
Gene coverage
Share of the 22 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| 12s | 21 | 95% |
| 16s | 21 | 95% |
| coi | 13 | 59% |
| rag1 | 10 | 45% |
| enc1 | 8 | 36% |
| myh6 | 7 | 32% |
| zic1 | 4 | 18% |
| ficd | 2 | 9% |
| rhodopsin | 2 | 9% |
| sh3px3 | 2 | 9% |
| glyt | 1 | 5% |
| plagl2 | 1 | 5% |
| ptr | 1 | 5% |
| tbr1 | 1 | 5% |
| 4c4 | 0 | 0% |
| cytb | 0 | 0% |
| hoxc6a | 0 | 0% |
| kiaa1239 | 0 | 0% |
| nd2 | 0 | 0% |
| nd4 | 0 | 0% |
| panx2 | 0 | 0% |
| rag2 | 0 | 0% |
| ripk4 | 0 | 0% |
| sidkey | 0 | 0% |
| sreb2 | 0 | 0% |
| svep1 | 0 | 0% |
| vcpip | 0 | 0% |
Fossil calibrations
- Cylothone plus Stigmops (Sigmops sp.†) 12.62 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Gonostomatidae data (JSON format)
Species list for Gonostomatidae (CSV format)
Phylogenies
There were 76 species that caused Gonostomatidae to be inferred as paraphyletic.
Time-calibrated phylogeny of only species in Gonostomatidae
Time-calibrated phylogeny of "Gonostomatidae"
Sequence data
Phylip sequences for Gonostomatidae
Nexus file for Gonostomatidae (includes character partitions and phylogeny)