Cirrhitioidei
49 of 76 species (64%) have genetic data.
Contents
| Taxon | Rank | Sampled / total | Sampling | Mean λDR |
|---|---|---|---|---|
| Cirrhitidae | Family | 12 / 33 | 0.04 | |
| Cheilodactylidae* | Family | 23 / 27 | 0.19 | |
| Chironemidae | Family | 6 / 6 | 0.05 | |
| Aplodactylidae | Family | 5 / 5 | 0.04 | |
| Latridae | Family | 3 / 5 | 0.09 |
Taxa marked with * were not recovered as monophyletic in our phylogenetic analysis.
Species
Largest genera
Sampled species out of the total in each genus:
- Cheilodactylus 14/16
- Cirrhitichthys 2/8
- Nemadactylus 6/7
- Chironemus 6/6
- Paracirrhites 3/6
All species
Species with genetic data are in bold.
Species list
- Aplodactylus arctidens
- Aplodactylus etheridgii
- Aplodactylus lophodon
- Aplodactylus punctatus
- Aplodactylus westralis
- Cheilodactylus ephippium
- Cheilodactylus fasciatus
- Cheilodactylus fuscus
- Cheilodactylus gibbosus
- Cheilodactylus nigripes
- Cheilodactylus pixi
- Cheilodactylus plessisi
- Cheilodactylus quadricornis
- Cheilodactylus spectabilis
- Cheilodactylus variegatus
- Cheilodactylus vestitus
- Cheilodactylus vittatus
- Cheilodactylus zebra
- Cheilodactylus zonatus
- Chirodactylus brachydactylus
- Chirodactylus grandis
- Chirodactylus jessicalenorum
- Nemadactylus bergi
- Nemadactylus douglasii
- Nemadactylus gayi
- Nemadactylus macropterus
- Nemadactylus monodactylus
- Nemadactylus valenciennesi
- Chironemus bicornis
- Chironemus delfini
- Chironemus georgianus
- Chironemus maculosus
- Chironemus marmoratus
- Chironemus microlepis
- Amblycirrhitus bimacula
- Amblycirrhitus pinos
- Cirrhitichthys falco
- Cirrhitichthys oxycephalus
- Cirrhitus pinnulatus
- Cirrhitus rivulatus
- Itycirrhitus wilhelmi
- Neocirrhites armatus
- Notocirrhitus splendens
- Paracirrhites arcatus
- Paracirrhites forsteri
- Paracirrhites hemistictus
- Latridopsis ciliaris
- Latridopsis forsteri
- Latris lineata
- Cheilodactylus francisi
- Cheilodactylus rubrolabiatus
- Dactylophora nigricans
- Nemadactylus vemae
- Amblycirrhitus earnshawi
- Amblycirrhitus oxyrhynchos
- Amblycirrhitus unimacula
- Cirrhitichthys aprinus
- Cirrhitichthys aureus
- Cirrhitichthys bleekeri
- Cirrhitichthys calliurus
- Cirrhitichthys guichenoti
- Cirrhitichthys randalli
- Cirrhitops fasciatus
- Cirrhitops hubbardi
- Cirrhitops mascarenensis
- Cirrhitus albopunctatus
- Cirrhitus atlanticus
- Cristacirrhitus punctatus
- Cyprinocirrhites polyactis
- Isocirrhitus sexfasciatus
- Oxycirrhites typus
- Paracirrhites bicolor
- Paracirrhites nisus
- Paracirrhites xanthus
- Latris pacifica
- Mendosoma lineatum
Gene coverage
Share of the 49 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| cytb | 37 | 76% |
| 16s | 19 | 39% |
| coi | 16 | 33% |
| rag1 | 15 | 31% |
| zic1 | 15 | 31% |
| plagl2 | 14 | 29% |
| myh6 | 13 | 27% |
| tbr1 | 11 | 22% |
| sreb2 | 10 | 20% |
| nd4 | 9 | 18% |
| ptr | 9 | 18% |
| rhodopsin | 8 | 16% |
| sh3px3 | 8 | 16% |
| enc1 | 7 | 14% |
| ficd | 6 | 12% |
| glyt | 6 | 12% |
| kiaa1239 | 6 | 12% |
| sidkey | 5 | 10% |
| hoxc6a | 4 | 8% |
| ripk4 | 4 | 8% |
| panx2 | 2 | 4% |
| 4c4 | 1 | 2% |
| vcpip | 1 | 2% |
| 12s | 0 | 0% |
| nd2 | 0 | 0% |
| rag2 | 0 | 0% |
| svep1 | 0 | 0% |
Enclosed taxa
5 families
Fossil calibrations
No internal fossil calibrations are available for this group.
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Cirrhitioidei data (JSON format)
Species list for Cirrhitioidei (CSV format)
Phylogenies
Sequence data
Phylip sequences for Cirrhitioidei
Nexus file for Cirrhitioidei (includes character partitions and phylogeny)