Carangiformes
129 of 160 species (81%) have genetic data.
Contents
| Taxon | Rank | Sampled / total | Sampling | Mean λDR |
|---|---|---|---|---|
| Carangidae* | Family | 118 / 148 | 0.12 | |
| Echeneidae | Family | 8 / 8 | 0.05 | |
| Coryphaenidae | Family | 2 / 2 | 0.03 | |
| Nematistiidae | Family | 0 / 1 | ||
| Rachycentridae | Family | 1 / 1 | 0.02 |
Taxa marked with * were not recovered as monophyletic in our phylogenetic analysis.
Species
Largest genera
Sampled species out of the total in each genus:
- Carangoides 14/20
- Trachinotus 14/20
- Caranx 16/18
- Trachurus 13/15
- Decapterus 9/11
All species
Species with genetic data are in bold.
Species list
- Alectis alexandrina
- Alectis ciliaris
- Alectis indica
- Alepes djedaba
- Alepes kleinii
- Alepes melanoptera
- Alepes vari
- Atropus atropos
- Atule mate
- Carangoides armatus
- Carangoides bajad
- Carangoides bartholomaei
- Carangoides chrysophrys
- Carangoides dinema
- Carangoides equula
- Carangoides ferdau
- Carangoides fulvoguttatus
- Carangoides gymnostethus
- Carangoides hedlandensis
- Carangoides malabaricus
- Carangoides orthogrammus
- Carangoides otrynter
- Carangoides talamparoides
- Caranx bucculentus
- Caranx caballus
- Caranx caninus
- Caranx crysos
- Caranx heberi
- Caranx hippos
- Caranx ignobilis
- Caranx latus
- Caranx lugubris
- Caranx melampygus
- Caranx papuensis
- Caranx rhonchus
- Caranx ruber
- Caranx sexfasciatus
- Caranx tille
- Caranx vinctus
- Chloroscombrus chrysurus
- Chloroscombrus orqueta
- Decapterus akaadsi
- Decapterus kurroides
- Decapterus macarellus
- Decapterus macrosoma
- Decapterus maruadsi
- Decapterus muroadsi
- Decapterus punctatus
- Decapterus russelli
- Decapterus tabl
- Elagatis bipinnulata
- Gnathanodon speciosus
- Hemicaranx leucurus
- Hemicaranx zelotes
- Lichia amia
- Megalaspis cordyla
- Naucrates ductor
- Oligoplites altus
- Oligoplites saliens
- Oligoplites saurus
- Parastromateus niger
- Parona signata
- Pseudocaranx chilensis
- Pseudocaranx dentex
- Pseudocaranx wrighti
- Scomberoides commersonnianus
- Scomberoides lysan
- Scomberoides tala
- Scomberoides tol
- Selar boops
- Selar crumenophthalmus
- Selaroides leptolepis
- Selene brevoortii
- Selene brownii
- Selene dorsalis
- Selene orstedii
- Selene peruviana
- Selene setapinnis
- Selene vomer
- Seriola carpenteri
- Seriola dumerili
- Seriola fasciata
- Seriola hippos
- Seriola lalandi
- Seriola quinqueradiata
- Seriola rivoliana
- Seriola zonata
- Seriolina nigrofasciata
- Trachinotus africanus
- Trachinotus anak
- Trachinotus baillonii
- Trachinotus blochii
- Trachinotus botla
- Trachinotus carolinus
- Trachinotus coppingeri
- Trachinotus falcatus
- Trachinotus goodei
- Trachinotus goreensis
- Trachinotus ovatus
- Trachinotus paitensis
- Trachinotus rhodopus
- Trachinotus teraia
- Trachurus capensis
- Trachurus declivis
- Trachurus delagoa
- Trachurus japonicus
- Trachurus lathami
- Trachurus longimanus
- Trachurus mediterraneus
- Trachurus murphyi
- Trachurus novaezelandiae
- Trachurus picturatus
- Trachurus symmetricus
- Trachurus trachurus
- Trachurus trecae
- Uraspis helvola
- Uraspis secunda
- Uraspis uraspis
- Coryphaena equiselis
- Coryphaena hippurus
- Echeneis naucrates
- Echeneis neucratoides
- Phtheirichthys lineatus
- Remora albescens
- Remora australis
- Remora brachyptera
- Remora osteochir
- Remora remora
- Rachycentron canadum
- Alepes apercna
- Campogramma glaycos
- Carangoides ciliarius
- Carangoides coeruleopinnatus
- Carangoides humerosus
- Carangoides oblongus
- Carangoides plagiotaenia
- Carangoides praeustus
- Caranx fischeri
- Caranx senegallus
- Decapterus koheru
- Decapterus scombrinus
- Hemicaranx amblyrhynchus
- Hemicaranx bicolor
- Oligoplites palometa
- Oligoplites refulgens
- Pantolabus radiatus
- Pseudocaranx dinjerra
- Selene spixii
- Seriola peruana
- Trachinotus cayennensis
- Trachinotus kennedyi
- Trachinotus marginatus
- Trachinotus maxillosus
- Trachinotus mookalee
- Trachinotus stilbe
- Trachurus aleevi
- Trachurus indicus
- Ulua aurochs
- Ulua mentalis
- Nematistius pectoralis
Gene coverage
Share of the 129 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| coi | 106 | 82% |
| cytb | 80 | 62% |
| 16s | 57 | 44% |
| zic1 | 25 | 19% |
| 12s | 23 | 18% |
| rhodopsin | 22 | 17% |
| kiaa1239 | 14 | 11% |
| rag1 | 14 | 11% |
| tbr1 | 14 | 11% |
| nd2 | 12 | 9% |
| ptr | 12 | 9% |
| myh6 | 11 | 9% |
| panx2 | 10 | 8% |
| vcpip | 9 | 7% |
| plagl2 | 8 | 6% |
| ficd | 7 | 5% |
| glyt | 6 | 5% |
| sh3px3 | 6 | 5% |
| svep1 | 6 | 5% |
| hoxc6a | 5 | 4% |
| sidkey | 5 | 4% |
| 4c4 | 4 | 3% |
| sreb2 | 4 | 3% |
| enc1 | 3 | 2% |
| nd4 | 2 | 2% |
| ripk4 | 2 | 2% |
| rag2 | 1 | 1% |
Enclosed taxa
5 families
Fossil calibrations
- Total group Echeneoidei (Ductor vestenae†) 49 Ma
- Total group Echeneidae (Oligoremora rhenana†) 29.62 Ma
- Total group Scomberoidini (Scomberoides spinosus†) 19.3 Ma
- Total group Carangini (Eastmanalepes primaevus†) 49 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Carangiformes data (JSON format)
Species list for Carangiformes (CSV format)
Phylogenies
Sequence data
Phylip sequences for Carangiformes
Nexus file for Carangiformes (includes character partitions and phylogeny)