Acipenseriformes
26 of 27 species (96%) have genetic data.
Contents
| Taxon | Rank | Sampled / total | Sampling | Mean λDR |
|---|---|---|---|---|
| Acipenseridae | Family | 24 / 25 | 0.16 | |
| Polyodontidae | Family | 2 / 2 | 0.01 |
Species
Largest genera
Sampled species out of the total in each genus:
- Acipenser 17/17
- Pseudoscaphirhynchus 2/3
- Scaphirhynchus 3/3
- Huso 2/2
- Polyodon 1/1
Familiar species
Well-known and model species in Acipenseriformes. Species with genetic data are in bold.
- Acipenser ruthenus (sterlet)
All species
Species with genetic data are in bold.
Species list
- Acipenser baerii
- Acipenser brevirostrum
- Acipenser dabryanus
- Acipenser fulvescens
- Acipenser gueldenstaedtii
- Acipenser medirostris
- Acipenser mikadoi
- Acipenser naccarii
- Acipenser nudiventris
- Acipenser oxyrinchus
- Acipenser persicus
- Acipenser ruthenus
- Acipenser schrenckii
- Acipenser sinensis
- Acipenser stellatus
- Acipenser sturio
- Acipenser transmontanus
- Huso dauricus
- Huso huso
- Pseudoscaphirhynchus hermanni
- Pseudoscaphirhynchus kaufmanni
- Scaphirhynchus albus
- Scaphirhynchus platorynchus
- Scaphirhynchus suttkusi
- Polyodon spathula
- Psephurus gladius
- Pseudoscaphirhynchus fedtschenkoi
Gene coverage
Share of the 26 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| cytb | 26 | 100% |
| 12s | 25 | 96% |
| 16s | 25 | 96% |
| coi | 14 | 54% |
| rhodopsin | 6 | 23% |
| nd2 | 3 | 12% |
| rag1 | 3 | 12% |
| plagl2 | 2 | 8% |
| ptr | 2 | 8% |
| sh3px3 | 2 | 8% |
| sreb2 | 2 | 8% |
| zic1 | 2 | 8% |
| enc1 | 1 | 4% |
| rag2 | 1 | 4% |
| 4c4 | 0 | 0% |
| ficd | 0 | 0% |
| glyt | 0 | 0% |
| hoxc6a | 0 | 0% |
| kiaa1239 | 0 | 0% |
| myh6 | 0 | 0% |
| nd4 | 0 | 0% |
| panx2 | 0 | 0% |
| ripk4 | 0 | 0% |
| sidkey | 0 | 0% |
| svep1 | 0 | 0% |
| tbr1 | 0 | 0% |
| vcpip | 0 | 0% |
Enclosed taxa
2 families
Fossil calibrations
- Crown Chondrostei (Protopsephurus luii†) 120.8 Ma
- Crown Polyodontidae (Polyodon tuberculata†) 63.1 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Acipenseriformes data (JSON format)
Species list for Acipenseriformes (CSV format)
Phylogenies
Sequence data
Phylip sequences for Acipenseriformes
Nexus file for Acipenseriformes (includes character partitions and phylogeny)