Pholidae
12 of 15 species (80%) have genetic data.
Species
Largest genera
Sampled species out of the total in each genus:
- Pholis 9/11
- Apodichthys 2/2
- Rhodymenichthys 1/1
- Ulvicola 0/1
All species
Species with genetic data are in bold.
Species list
- Apodichthys flavidus
- Apodichthys fucorum
- Pholis clemensi
- Pholis crassispina
- Pholis fangi
- Pholis fasciata
- Pholis gunnellus
- Pholis laeta
- Pholis nebulosa
- Pholis ornata
- Pholis picta
- Rhodymenichthys dolichogaster
- Pholis nea
- Pholis schultzi
- Ulvicola sanctaerosae
Gene coverage
Share of the 12 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| coi | 12 | 100% |
| 16s | 9 | 75% |
| cytb | 8 | 67% |
| 12s | 6 | 50% |
| rag2 | 3 | 25% |
| rag1 | 2 | 17% |
| enc1 | 1 | 8% |
| glyt | 1 | 8% |
| myh6 | 1 | 8% |
| plagl2 | 1 | 8% |
| ptr | 1 | 8% |
| rhodopsin | 1 | 8% |
| sh3px3 | 1 | 8% |
| sreb2 | 1 | 8% |
| tbr1 | 1 | 8% |
| zic1 | 1 | 8% |
| 4c4 | 0 | 0% |
| ficd | 0 | 0% |
| hoxc6a | 0 | 0% |
| kiaa1239 | 0 | 0% |
| nd2 | 0 | 0% |
| nd4 | 0 | 0% |
| panx2 | 0 | 0% |
| ripk4 | 0 | 0% |
| sidkey | 0 | 0% |
| svep1 | 0 | 0% |
| vcpip | 0 | 0% |
Fossil calibrations
No internal fossil calibrations are available for this group.
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Pholidae data (JSON format)
Species list for Pholidae (CSV format)
Phylogenies
There were 27 species that caused Pholidae to be inferred as paraphyletic.
Time-calibrated phylogeny of only species in Pholidae
Time-calibrated phylogeny of "Pholidae"
Sequence data
Nexus file for Pholidae (includes character partitions and phylogeny)