Centrarchidae
33 of 38 species (87%) have genetic data.
Species
Largest genera
Sampled species out of the total in each genus:
- Lepomis 12/13
- Micropterus 9/13
- Ambloplites 4/4
- Enneacanthus 3/3
- Pomoxis 2/2
Familiar species
Well-known and model species in Centrarchidae. Species with genetic data are in bold.
- Micropterus salmoides (largemouth bass)
All species
Species with genetic data are in bold.
Species list
- Acantharchus pomotis
- Ambloplites ariommus
- Ambloplites cavifrons
- Ambloplites constellatus
- Ambloplites rupestris
- Archoplites interruptus
- Centrarchus macropterus
- Enneacanthus chaetodon
- Enneacanthus gloriosus
- Enneacanthus obesus
- Lepomis auritus
- Lepomis cyanellus
- Lepomis gibbosus
- Lepomis gulosus
- Lepomis humilis
- Lepomis macrochirus
- Lepomis marginatus
- Lepomis megalotis
- Lepomis microlophus
- Lepomis miniatus
- Lepomis punctatus
- Lepomis symmetricus
- Micropterus cataractae
- Micropterus coosae
- Micropterus dolomieu
- Micropterus floridanus
- Micropterus henshalli
- Micropterus notius
- Micropterus punctulatus
- Micropterus salmoides
- Micropterus treculii
- Pomoxis annularis
- Pomoxis nigromaculatus
- Lepomis peltastes
- Micropterus cahabae
- Micropterus chattahoochae
- Micropterus tallapoosae
- Micropterus warriorensis
Gene coverage
Share of the 33 sampled species with data for each gene
| Gene | Species with data | % of sampled species |
|---|---|---|
| 16s | 32 | 97% |
| 4c4 | 32 | 97% |
| coi | 32 | 97% |
| cytb | 32 | 97% |
| nd2 | 32 | 97% |
| rag1 | 32 | 97% |
| rhodopsin | 32 | 97% |
| myh6 | 9 | 27% |
| plagl2 | 9 | 27% |
| zic1 | 9 | 27% |
| sidkey | 7 | 21% |
| sreb2 | 7 | 21% |
| kiaa1239 | 6 | 18% |
| ptr | 6 | 18% |
| panx2 | 5 | 15% |
| ripk4 | 5 | 15% |
| sh3px3 | 5 | 15% |
| tbr1 | 5 | 15% |
| 12s | 4 | 12% |
| ficd | 4 | 12% |
| glyt | 4 | 12% |
| hoxc6a | 4 | 12% |
| vcpip | 3 | 9% |
| svep1 | 2 | 6% |
| enc1 | 1 | 3% |
| nd4 | 0 | 0% |
| rag2 | 0 | 0% |
Fossil calibrations
- Total group Archoplites (Archoplites clarki†) 15.4 Ma
Downloads
These data are released under the CC0 1.0 public domain dedication; please cite us if you use them (License).
Download Centrarchidae data (JSON format)
Species list for Centrarchidae (CSV format)
Phylogenies
Sequence data
Phylip sequences for Centrarchidae
Nexus file for Centrarchidae (includes character partitions and phylogeny)